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Data Mining applications in Bio- and Cheminformatics

Title:

The Utility of Different Representations of Protein Sequence for Predicting Functional Class. Bio informatics (2001), 17(5):173-181.

Edition:

-

Author(s):  

R.D. King, A. Karwath, A. Clare, and L. Dehaspe.


Title:

Warmr: A Data Mining Tool for Chemical Data. Journal of Computer-Aided Molecular Design (2001), 15(2):173-181.

Edition:

-

Author(s):  

R.D. King, A. Srinivasan, and L. Dehaspe.


Title:

A new 3D molecular structure representation based on quantum topology with application to structure-property relationships. Chemometrics and Intelligent Laboratory Systems (2001), 54(2):75-91.

Edition:

-

Author(s):  

B.K. Alsberg, N. Marchand-Geneste, and R.D. King.


Title:

Accurate prediction of protein functional class in the M. tuberculosis and E. coli genomes using data mining. Yeast (Comparative and Functional Genomics) (2000), 17:283-293.

Edition:

-

Author(s):  

R. D. King, A. Karwath, A. Clare, and L. Dehaspe.


Title:

Cascaded multiple classifiers for secondary structure prediction. Protein Science (2000), 9:1162-1176.

Edition:

-

Author(s):  

M. Ouali and R.D. King.


Title:

Pharmacophore Discovery using the Inductive Logic Programming system Progol. Machine Learning (1998), 30:241-270.

Edition:

-

Author(s):  

P. Finn, S. Muggleton, D. Page, and A. Srinivasan.


Title:

Structure-activity relationships derived by machine learning: The use of atoms and their bond connectivities to predict mutagenicity by inductive logic programming. Proc. Nat. Acad. Sci. U.S.A., (1996), 93:438-442.

Edition:

-

Author(s):  

R.D. King, S.H. Muggleton, A. Srinivasan, and M.J.E. Sternberg.


Title:

Quantitative structure-activity relationships by neural networks and inductive logic programming. I. The inhibition of dihydrofolate reductase by pyrimidines. Journal of Computer-Aided Molecular Design (1994), 8:405-420.

Edition:

-

Author(s):  

J.D. Hirst, R.D. King, and M.J.E. Sternberg.


Title:

Drug design by machine learning: The use of inductive logic programming to model the structure-activity relationships of trimethoprim analogues binding to dihydrofolate reductase. Proc. Nat. Acad. Sci. U.S.A.(1992), 89:11322-11326.

Edition:

-

Author(s):  

R.D. King, S. Muggleton, R.A. Lewis, and M.J.E. Sternberg.



General Data Mining

Title:

Relational Data Mining (book)

Edition:

Springer, Berlin, 2001

Author(s):  

Saso Dzeroski and Nada Lavrac (editors)


Title:

How to Upgrade Propositional Learners to First Order Logic: a case study

Edition:

Report CW 288, May 2002

Author(s):  

Wim Van Laer, Luc De Readt


Title:

A study of two sampling methods for analysing large datasets with ILP. Data Mining and Knowledge Discovery (1999), 3(1):95-123

Edition:

-

Author(s):  

A. Srinivasan.


Title:

Extracting context-sensitive models in Inductive Logic Programming. Machine Learning (2001), 44(3):301-324.

Edition:

-

Author(s):  

A. Srinivasan.


Title:

Discovery of frequent Datalog patterns, Data Mining and Knowledge Discovery (1999), 3(1):7-36.

Edition:

-

Author(s):  

L. Dehaspe and H. Toivonen.



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